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Final Project

Final Project Materials

Final Project Materials will be made available here as well as Brightspace.

Green Trail Examples

For the green trail, the goal is to recreate a figure or figure panel from a publication. In the Green Trail Example #1, this student was able to recreate Figure 1 from Xian et al. 2022

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Blue Trail Examples

For the blue trail, the goal is compare bioinformatic programs and contrast results. In the Blue Trail Example #1 & #2, the students successfully compared a genomic (STAR) vs transcriptomic (SALMON) aligner or fast-aligner (HISAT2). In Blue Trail Example #2, the students used nf-core/rnaseq to compare multiple aligners at once.

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Black Trail Examples

For the black trail, the goal is to test an original hypothesis and to generate results not seen in the published manuscript.